STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpVPyocin R2_PP, tail spike protein; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin. (185 aa)    
Predicted Functional Partners:
gpW
Pyocin R2_PP, baseplate protein; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.
 
 
 0.994
PSEEN4155
Putative pyocin R2_PP, tail sheath protein gpFI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
 
 0.984
gpJ
Pyocin R2_PP, baseplate/tail fiber protein; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.
 
  
 0.982
PSEEN4149
Putative pyocin R2_PP, tail formation GpD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
  
 0.979
gpI
Pyocin R2_PP, tail formation protein GpI; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.
 
  
 0.979
PSEEN4154
Putative pyocin R2_PP, tail tube protein GpFII; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
  
 0.957
PSEEN4151
Putative pyocin R2_PP, tail formation protein gpU; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
  
 0.955
PSEEN4164
Putative phage protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
  
 0.951
PSEEN4159
Putative phage variable tail fibre protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
 
     0.865
PSEEN4135
Putative Mu-like phage tail fiber protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
  
 0.819
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.