STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN4384Hypothetical protein; No homology to any previously reported sequences. (665 aa)    
Predicted Functional Partners:
PSEEN1065
Phosphatidylcholine-hydrolyzing phospholipase C; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.587
pvdZ
Siderophore biosynthesis protein; Function of homologous gene experimentally demonstrated in an other organism; factor.
  
     0.586
pvdA
L-ornithine N5-oxygenase PvdA; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.530
PSEEN4465
Putative methylated DNA-protein cysteine methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.460
PSEEN1407
Putative C4-dicarboxylate transporter/malic acid transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
  
     0.456
tufB
Protein chain elongation factor (EF-Tu-B); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.451
tufA
Protein chain elongation factor (EF-Tu-A); Function of homologous gene experimentally demonstrated in an other organism; factor.
    
 
 0.451
PSEEN0980
Putative L-ornithine 5-/L-lysine 6-monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
     0.435
PSEEN4383
PTS system, N-acetylglucosamine-specific IIBC component; Function of strongly homologous gene; enzyme.
       0.435
PSEEN4382
Putative PTS sugar transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.422
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.