STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aapMGeneral amino acid ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter. (365 aa)    
Predicted Functional Partners:
aapP
General amino acid ABC transporter, ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.997
aapQ
General amino acid ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
0.996
aapJ
General amino acid ABC transporter, periplasmic binding protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 0.992
PSEEN2663
Putative amino acid ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.869
PSEEN5085
Putative amino acid ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.811
gltL
Glutamate-aspartate ABC transporter, ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 
 0.798
PSEEN5259
Putative amino acid ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.766
PSEEN0205
Putative amino acid ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
 
 0.724
PSEEN0207
Putative amino acid ABC transporter, periplasmic amino acid-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.687
PSEEN5087
Putative amino acid ABC transporter, periplasmic amino acid-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter; Belongs to the bacterial solute-binding protein 3 family.
 
 0.641
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.