STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN4613Putative transcriptional regulator, IclR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (258 aa)    
Predicted Functional Partners:
PSEEN4017
Putative allophanate hydrolase subunit 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
    0.724
PSEEN4016
Putative allophanate hydrolase subunit 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
    0.636
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
  
 0.635
fah
Fumarylacetoacetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.625
PSEEN2654
Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.576
PSEEN0729
Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.560
PSEEN1848
Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.548
maiA
Maleylacetoacetate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.548
PSEEN4453
Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.524
PSEEN1737
Putative transcriptional regulator, GntR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
 
  
 0.515
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.