Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PSEEN3582 | PSEEN4647 | PSEEN3582 | PSEEN4647 | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.402 |
PSEEN3582 | PSEEN5528 | PSEEN3582 | PSEEN5528 | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.444 |
PSEEN4647 | PSEEN3582 | PSEEN4647 | PSEEN3582 | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.402 |
PSEEN4647 | PSEEN4649 | PSEEN4647 | PSEEN4649 | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.468 |
PSEEN4647 | PSEEN5528 | PSEEN4647 | PSEEN5528 | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.444 |
PSEEN4647 | soxA | PSEEN4647 | PSEEN5159 | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Sarcosine oxidase (alpha subunit) oxidoreductase protein; Function of strongly homologous gene; enzyme; Belongs to the GcvT family. | 0.472 |
PSEEN4649 | PSEEN4647 | PSEEN4649 | PSEEN4647 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.468 |
PSEEN5528 | PSEEN3582 | PSEEN5528 | PSEEN3582 | Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.444 |
PSEEN5528 | PSEEN4647 | PSEEN5528 | PSEEN4647 | Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.444 |
PSEEN5528 | soxA | PSEEN5528 | PSEEN5159 | Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | Sarcosine oxidase (alpha subunit) oxidoreductase protein; Function of strongly homologous gene; enzyme; Belongs to the GcvT family. | 0.672 |
soxA | PSEEN4647 | PSEEN5159 | PSEEN4647 | Sarcosine oxidase (alpha subunit) oxidoreductase protein; Function of strongly homologous gene; enzyme; Belongs to the GcvT family. | Putative carbon-nitrogen hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.472 |
soxA | PSEEN5528 | PSEEN5159 | PSEEN5528 | Sarcosine oxidase (alpha subunit) oxidoreductase protein; Function of strongly homologous gene; enzyme; Belongs to the GcvT family. | Putative polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. | 0.672 |