STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN4687Hypothetical protein; No homology to any previously reported sequences. (120 aa)    
Predicted Functional Partners:
PSEEN4686
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.964
pilE
Type IV pili biogenesis protein PilE; Function of strongly homologous gene; structural protein.
  
  
 0.956
PSEEN4685
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.948
PSEEN4688
Putative type IV pili biogenesis protein FimT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structural protein.
  
  
 0.817
PSEEN4683
Putative oxidoreductase, FAD-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.623
PSEEN0332
Putative type IV pili biogenesis protein pilP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structural protein.
  
  
 0.557
pstA
Phosphate ABC transporter, permease protein; Function of strongly homologous gene; transporter.
   
    0.430
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.