STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEEN5016Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (166 aa)    
Predicted Functional Partners:
PSEEN5015
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.782
fda
Fructose-1,6-bisphosphate aldolase, class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
      0.757
PSEEN5017
Putative sensory box protein/response regulator (hybrid); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.
       0.717
PSEEN4117
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.637
PSEEN1174
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.571
PSEEN5418
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.488
rlmF
Conserved hypothetical protein; Specifically methylates the adenine in position 1618 of 23S rRNA.
 
     0.483
PSEEN5014
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.475
PSEEN0169
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.453
ppnP
Conserved hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.
  
     0.444
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.