STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
PSEEN5259Putative amino acid ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (261 aa)    
Predicted Functional Partners:
PSEEN5260
Putative amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.997
PSEEN5261
Putative amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.997
PSEEN5258
Putative amino acid ABC transporter, periplasmic amino acid-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.945
PSEEN0206
Putative amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 0.918
PSEEN5086
Putative amino acid ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.
 
 
 0.883
gltK
Glutamate-aspartate ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.881
gltJ
Glutamate/aspartate ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.877
aapM
General amino acid ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.772
PSEEN3751
Putative ABC efflux transporter, permease/ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
 
     
0.766
aotM-2
Arginine/ornithine ABC transporter, permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.756
Your Current Organism:
Pseudomonas entomophila
NCBI taxonomy Id: 384676
Other names: P. entomophila L48, Pseudomonas entomophila L48, Pseudomonas entomophila str. L48, Pseudomonas entomophila strain L48
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