STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA_U000400Macro domain-containing protein. (364 aa)    
Predicted Functional Partners:
A0A0R0FUK3
BRCT domain-containing protein.
   
 0.984
I1M5N0_SOYBN
BRCT domain-containing protein.
   
 0.984
A0A0R0F1V1
Uncharacterized protein.
    
 
 0.950
A0A0R0JPE3
Uncharacterized protein.
    
 
 0.950
I1LC95_SOYBN
Uncharacterized protein.
    
 
 0.950
I1NI57_SOYBN
Uncharacterized protein.
    
 
 0.950
I1JCZ1_SOYBN
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
   
 0.939
I1MNX6_SOYBN
Aminotran_1_2 domain-containing protein.
  
 
 0.939
K7K7A2_SOYBN
DNA_ligase_A_N domain-containing protein.
  
 0.872
K7K7A3_SOYBN
DNA_LIGASE_A3 domain-containing protein.
  
 0.872
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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