STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLYMA_U027300Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (600 aa)    
Predicted Functional Partners:
I1N5E5_SOYBN
Uncharacterized protein.
   
  
 0.714
A0A0R0FNB1
BTB domain-containing protein.
      
 0.711
A0A0R0HGV4
GRAS domain-containing protein; Belongs to the GRAS family.
      
 0.711
A0A368UI42
BTB domain-containing protein.
      
 0.711
I1J4E8_SOYBN
Uncharacterized protein.
      
 0.711
I1JN25_SOYBN
Uncharacterized protein.
      
 0.711
I1KEZ7_SOYBN
Uncharacterized protein.
      
 0.711
I1KJS9_SOYBN
Uncharacterized protein.
      
 0.711
I1KPU6_SOYBN
Uncharacterized protein.
      
 0.711
I1L0M9_SOYBN
Uncharacterized protein.
      
 0.711
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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