STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R0EX12Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (156 aa)    
Predicted Functional Partners:
I1KHX1_SOYBN
Histone domain-containing protein.
   
 0.980
A0A0R0HLG7
Histone domain-containing protein.
   
 0.975
C6SV66_SOYBN
Histone H3; Belongs to the histone H3 family.
   
 0.975
K7MPE3_SOYBN
Histone domain-containing protein.
   
 0.975
C6SZA4_SOYBN
Histone H3; Belongs to the histone H3 family.
   
 0.973
I1M828_SOYBN
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.971
K7KAN2_SOYBN
Uncharacterized protein.
    
 0.971
K7K4A3_SOYBN
GYF domain-containing protein.
    
 0.966
K7KGZ1_SOYBN
Plus3 domain-containing protein.
    
 0.966
K7LNI2_SOYBN
Uncharacterized protein.
    
 0.966
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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