Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0R0EZK7 | A0A0R4J389 | A0A0R0EZK7 | A0A0R4J389 | DUF1336 domain-containing protein. | Uncharacterized protein. | 0.475 |
A0A0R0EZK7 | K7KDA5_SOYBN | A0A0R0EZK7 | K7KDA5 | DUF1336 domain-containing protein. | Uncharacterized protein. | 0.456 |
A0A0R0EZK7 | psaI | A0A0R0EZK7 | P49159 | DUF1336 domain-containing protein. | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family. | 0.461 |
A0A0R0EZK7 | psbF | A0A0R0EZK7 | Q2PMR8 | DUF1336 domain-containing protein. | Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.534 |
A0A0R0EZK7 | psbH | A0A0R0EZK7 | Q2PMQ6 | DUF1336 domain-containing protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbH family. | 0.456 |
A0A0R0EZK7 | psbJ | A0A0R0EZK7 | Q2PMS0 | DUF1336 domain-containing protein. | Photosystem II reaction center protein J; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.514 |
A0A0R0EZK7 | psbK | A0A0R0EZK7 | Q2PMS6 | DUF1336 domain-containing protein. | Photosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.534 |
A0A0R0EZK7 | psbL | A0A0R0EZK7 | Q2PMR9 | DUF1336 domain-containing protein. | Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. | 0.534 |
A0A0R0EZK7 | psbM | A0A0R0EZK7 | Q2PMT7 | DUF1336 domain-containing protein. | Photosystem II reaction center protein M; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface. | 0.485 |
A0A0R0EZK7 | psbT | A0A0R0EZK7 | Q2PMQ8 | DUF1336 domain-containing protein. | Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. | 0.534 |
A0A0R4J389 | A0A0R0EZK7 | A0A0R4J389 | A0A0R0EZK7 | Uncharacterized protein. | DUF1336 domain-containing protein. | 0.475 |
A0A0R4J389 | K7KDA5_SOYBN | A0A0R4J389 | K7KDA5 | Uncharacterized protein. | Uncharacterized protein. | 0.697 |
A0A0R4J389 | psaI | A0A0R4J389 | P49159 | Uncharacterized protein. | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family. | 0.974 |
A0A0R4J389 | psbF | A0A0R4J389 | Q2PMR8 | Uncharacterized protein. | Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.749 |
A0A0R4J389 | psbH | A0A0R4J389 | Q2PMQ6 | Uncharacterized protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbH family. | 0.808 |
A0A0R4J389 | psbK | A0A0R4J389 | Q2PMS6 | Uncharacterized protein. | Photosystem II reaction center protein K; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.736 |
A0A0R4J389 | psbL | A0A0R4J389 | Q2PMR9 | Uncharacterized protein. | Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. | 0.749 |
K7KDA5_SOYBN | A0A0R0EZK7 | K7KDA5 | A0A0R0EZK7 | Uncharacterized protein. | DUF1336 domain-containing protein. | 0.456 |
K7KDA5_SOYBN | A0A0R4J389 | K7KDA5 | A0A0R4J389 | Uncharacterized protein. | Uncharacterized protein. | 0.697 |
K7KDA5_SOYBN | psaI | K7KDA5 | P49159 | Uncharacterized protein. | Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family. | 0.800 |
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