STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R0F6E4Uncharacterized protein. (171 aa)    
Predicted Functional Partners:
I1LCZ6_SOYBN
Uncharacterized protein.
   
 0.583
I1NHH0_SOYBN
Uncharacterized protein.
   
 0.583
I1MYA5_SOYBN
Zinc-hook domain-containing protein.
   
 0.576
I1JFF5_SOYBN
WD_REPEATS_REGION domain-containing protein.
   
 0.526
I1L7Y7_SOYBN
WD_REPEATS_REGION domain-containing protein.
   
 0.526
I1M3I7_SOYBN
WD_REPEATS_REGION domain-containing protein.
   
 0.526
K7LW89_SOYBN
WD_REPEATS_REGION domain-containing protein.
   
 0.526
A0A0R0HKU4
B30.2/SPRY domain-containing protein.
    
 0.518
I1LPA8_SOYBN
B30.2/SPRY domain-containing protein.
    
 0.518
C6T868_SOYBN
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
 0.505
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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