A0A0R0FNS9 protein (Glycine max) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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[Homology]

Score

A0A0R0FNS9

RING-type domain-containing protein. (68 aa)

Predicted Functional Partners:

I1LNB9_SOYBN

0.475

I1MYJ1_SOYBN

0.475

K7MGY1_SOYBN

0.475

I1MDQ7_SOYBN

0.455

A0A0R0FG14

0.424

A0A0R0GI38

0.424

A0A0R0HB65

0.424

A0A0R0ICV3

0.424

A0A368ULP3

0.424

I1JQ39_SOYBN

0.424

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0FG14	A0A0R0FNS9	A0A0R0FG14	A0A0R0FNS9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	RING-type domain-containing protein.	0.424
A0A0R0FG14	I1LNB9_SOYBN	A0A0R0FG14	I1LNB9	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	HORMA domain-containing protein.	0.684
A0A0R0FG14	I1MDQ7_SOYBN	A0A0R0FG14	I1MDQ7	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.839
A0A0R0FG14	I1MYJ1_SOYBN	A0A0R0FG14	I1MYJ1	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	HORMA domain-containing protein.	0.684
A0A0R0FG14	K7MGY1_SOYBN	A0A0R0FG14	K7MGY1	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	HORMA domain-containing protein.	0.684
A0A0R0FNS9	A0A0R0FG14	A0A0R0FNS9	A0A0R0FG14	RING-type domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.424
A0A0R0FNS9	A0A0R0GI38	A0A0R0FNS9	A0A0R0GI38	RING-type domain-containing protein.	Uncharacterized protein.	0.424
A0A0R0FNS9	A0A0R0HB65	A0A0R0FNS9	A0A0R0HB65	RING-type domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.424
A0A0R0FNS9	A0A0R0ICV3	A0A0R0FNS9	A0A0R0ICV3	RING-type domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.424
A0A0R0FNS9	A0A368ULP3	A0A0R0FNS9	A0A368ULP3	RING-type domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.424
A0A0R0FNS9	I1JQ39_SOYBN	A0A0R0FNS9	I1JQ39	RING-type domain-containing protein.	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.424
A0A0R0FNS9	I1LNB9_SOYBN	A0A0R0FNS9	I1LNB9	RING-type domain-containing protein.	HORMA domain-containing protein.	0.475
A0A0R0FNS9	I1MDQ7_SOYBN	A0A0R0FNS9	I1MDQ7	RING-type domain-containing protein.	Uncharacterized protein.	0.455
A0A0R0FNS9	I1MYJ1_SOYBN	A0A0R0FNS9	I1MYJ1	RING-type domain-containing protein.	HORMA domain-containing protein.	0.475
A0A0R0FNS9	K7MGY1_SOYBN	A0A0R0FNS9	K7MGY1	RING-type domain-containing protein.	HORMA domain-containing protein.	0.475
A0A0R0GI38	A0A0R0FNS9	A0A0R0GI38	A0A0R0FNS9	Uncharacterized protein.	RING-type domain-containing protein.	0.424
A0A0R0GI38	I1LNB9_SOYBN	A0A0R0GI38	I1LNB9	Uncharacterized protein.	HORMA domain-containing protein.	0.684
A0A0R0GI38	I1MDQ7_SOYBN	A0A0R0GI38	I1MDQ7	Uncharacterized protein.	Uncharacterized protein.	0.839
A0A0R0GI38	I1MYJ1_SOYBN	A0A0R0GI38	I1MYJ1	Uncharacterized protein.	HORMA domain-containing protein.	0.684
A0A0R0GI38	K7MGY1_SOYBN	A0A0R0GI38	K7MGY1	Uncharacterized protein.	HORMA domain-containing protein.	0.684

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Network Stats

number of nodes:

11

number of edges:

50

average node degree:

9.09

avg. local clustering coefficient:

0.923

expected number of edges:

13

PPI enrichment p-value:

1.81e-14

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006865

Amino acid transport

8 of 53

1.83

3.78

8.05e-11

GO:0006810

Transport

9 of 642

0.8

0.71

0.00015

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0016597

Amino acid binding

5 of 11

2.31

3.59

6.53e-08

GO:0015276

Ligand-gated ion channel activity

3 of 11

2.09

1.6

0.00078

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0030288

Outer membrane-bounded periplasmic space

8 of 32

2.05

5.16

2.00e-13

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:4632

Bacterial extracellular solute-binding proteins, family 3, and NMT1/THI5 like

8 of 11

2.51

7.39

5.15e-16

CL:4629

Bacterial extracellular solute-binding proteins, family 3, and Arginine metabolism

9 of 19

2.33

7.18

8.61e-17

CL:4634

Bacterial extracellular solute-binding proteins, family 3

4 of 5

2.55

3.4

3.58e-07

CL:4644

Amino acid binding

3 of 5

2.43

2.17

8.15e-05

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0042597

Periplasmic space

8 of 133

1.43

2.22

1.79e-08

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00497

Bacterial extracellular solute-binding proteins, family 3

8 of 12

2.47

7.08

1.76e-15

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR001638

Solute-binding protein family 3/N-terminal domain of MltF

9 of 17

2.37

7.37

6.74e-17

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