STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHP1-1Chromo domain-containing protein. (448 aa)    
Predicted Functional Partners:
GMPHD6
PHD-type domain-containing protein.
      
 0.854
A0A0R0HLG7
Histone domain-containing protein.
    
 0.803
C6SV66_SOYBN
Histone H3; Belongs to the histone H3 family.
    
 0.803
C6SZA4_SOYBN
Histone H3; Belongs to the histone H3 family.
    
 0.803
I1KHX1_SOYBN
Histone domain-containing protein.
    
 0.803
K7MPE3_SOYBN
Histone domain-containing protein.
    
 0.802
K7K4I0_SOYBN
Uncharacterized protein.
    
 0.750
K7K6P9_SOYBN
Uncharacterized protein.
    
 0.750
K7LNB1_SOYBN
Uncharacterized protein.
    
 0.750
K7MHC3_SOYBN
Uncharacterized protein.
    
 0.750
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.