STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R0FYD0Uncharacterized protein. (151 aa)    
Predicted Functional Partners:
K7K7A2_SOYBN
DNA_ligase_A_N domain-containing protein.
   
 0.799
K7K7A3_SOYBN
DNA_LIGASE_A3 domain-containing protein.
   
 0.799
K7MVF2_SOYBN
DNA ligase.
   
 0.799
A0A0R0G1X4
DNA ligase.
    
 0.786
A0A0R0IAM2
Uncharacterized protein.
    
 0.786
A0A0R0F6H1
Ku domain-containing protein.
    
 0.761
I1K2X5_SOYBN
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.761
K7KX46_SOYBN
Uncharacterized protein.
    
 0.761
A0A0R0I7S2
Ku_C domain-containing protein.
    
 0.669
K7N5J8_SOYBN
SAP domain-containing protein.
    
 0.669
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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