STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R0GU87Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (388 aa)    
Predicted Functional Partners:
A0A0R4J2U8
TRANSKETOLASE_1 domain-containing protein.
   
 0.928
A0A0R4J653
TRANSKETOLASE_1 domain-containing protein.
   
 0.928
I1LFG4_SOYBN
TRANSKETOLASE_1 domain-containing protein.
   
 0.928
A0A0R0EAH9
Uncharacterized protein.
    
 0.921
A0A0R0I6J5
Uncharacterized protein.
    
 0.921
A0A0R0KPC8
Uncharacterized protein.
    
 0.921
I1MGA3_SOYBN
Uncharacterized protein.
    
 0.921
I1NC83_SOYBN
Uncharacterized protein.
    
 0.921
I1JMH3_SOYBN
Pribosyltran_N domain-containing protein.
   
 0.914
I1K115_SOYBN
Pribosyltran_N domain-containing protein.
   
 0.914
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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