STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R0H642Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
A0A0R4J5K1
RRM domain-containing protein.
   
 0.799
I1L4R0_SOYBN
RRM domain-containing protein.
   
 0.799
I1LDU4_SOYBN
Uncharacterized protein.
     
 0.709
I1NGQ5_SOYBN
Uncharacterized protein.
     
 0.709
I1LUI7_SOYBN
Nuclear cap-binding protein subunit 2.
    
 0.680
I1M3Q3_SOYBN
Nuclear cap-binding protein subunit 2.
    
 0.680
A0A0R4J3R4
RPOLD domain-containing protein.
     
 0.661
I1NDC0_SOYBN
RPOLD domain-containing protein.
     
 0.661
I1MLB1_SOYBN
MIF4G domain-containing protein.
   
 0.644
I1N7Z9_SOYBN
MIF4G domain-containing protein.
   
 0.644
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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