A0A0R0J743 protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0R0J743

Uncharacterized protein. (140 aa)

Predicted Functional Partners:

C6TKV3_SOYBN

0.904

I1KJ84_SOYBN

0.904

I1LF90_SOYBN

0.904

I1NF53_SOYBN

0.904

K7MFY1_SOYBN

0.904

I1LLC6_SOYBN

0.892

I1MR50_SOYBN

0.892

K7M0S3_SOYBN

0.892

K7MDG9_SOYBN

0.892

K7N0R4_SOYBN

0.892

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0J743	C6TKV3_SOYBN	A0A0R0J743	C6TKV3	Uncharacterized protein.	DHO_dh domain-containing protein.	0.904
A0A0R0J743	I1KJ84_SOYBN	A0A0R0J743	I1KJ84	Uncharacterized protein.	DHO_dh domain-containing protein.	0.904
A0A0R0J743	I1LF90_SOYBN	A0A0R0J743	I1LF90	Uncharacterized protein.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.904
A0A0R0J743	I1LLC6_SOYBN	A0A0R0J743	I1LLC6	Uncharacterized protein.	OMPdecase domain-containing protein.	0.892
A0A0R0J743	I1MR50_SOYBN	A0A0R0J743	I1MR50	Uncharacterized protein.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.892
A0A0R0J743	I1NF53_SOYBN	A0A0R0J743	I1NF53	Uncharacterized protein.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.904
A0A0R0J743	K7M0S3_SOYBN	A0A0R0J743	K7M0S3	Uncharacterized protein.	OMPdecase domain-containing protein.	0.892
A0A0R0J743	K7MDG9_SOYBN	A0A0R0J743	K7MDG9	Uncharacterized protein.	Uncharacterized protein.	0.892
A0A0R0J743	K7MFY1_SOYBN	A0A0R0J743	K7MFY1	Uncharacterized protein.	DHO_dh domain-containing protein.	0.904
A0A0R0J743	K7N0R4_SOYBN	A0A0R0J743	K7N0R4	Uncharacterized protein.	OMPdecase domain-containing protein.	0.892
C6TKV3_SOYBN	A0A0R0J743	C6TKV3	A0A0R0J743	DHO_dh domain-containing protein.	Uncharacterized protein.	0.904
C6TKV3_SOYBN	I1KJ84_SOYBN	C6TKV3	I1KJ84	DHO_dh domain-containing protein.	DHO_dh domain-containing protein.	0.900
C6TKV3_SOYBN	I1LF90_SOYBN	C6TKV3	I1LF90	DHO_dh domain-containing protein.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.479
C6TKV3_SOYBN	I1LLC6_SOYBN	C6TKV3	I1LLC6	DHO_dh domain-containing protein.	OMPdecase domain-containing protein.	0.916
C6TKV3_SOYBN	I1MR50_SOYBN	C6TKV3	I1MR50	DHO_dh domain-containing protein.	Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.	0.916
C6TKV3_SOYBN	I1NF53_SOYBN	C6TKV3	I1NF53	DHO_dh domain-containing protein.	Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.	0.479
C6TKV3_SOYBN	K7M0S3_SOYBN	C6TKV3	K7M0S3	DHO_dh domain-containing protein.	OMPdecase domain-containing protein.	0.916
C6TKV3_SOYBN	K7MDG9_SOYBN	C6TKV3	K7MDG9	DHO_dh domain-containing protein.	Uncharacterized protein.	0.916
C6TKV3_SOYBN	K7MFY1_SOYBN	C6TKV3	K7MFY1	DHO_dh domain-containing protein.	DHO_dh domain-containing protein.	0.479
C6TKV3_SOYBN	K7N0R4_SOYBN	C6TKV3	K7N0R4	DHO_dh domain-containing protein.	OMPdecase domain-containing protein.	0.916