STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0R0LGS4Uncharacterized protein. (121 aa)    
Predicted Functional Partners:
GLYMA_U034000
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.971
A0A0R0EMU9
SANT domain-containing protein.
    
 0.952
K7K5C7_SOYBN
SANT domain-containing protein.
    
 0.952
K7LKJ3_SOYBN
Myb_DNA-bind_7 domain-containing protein.
    
 0.952
K7LMF8_SOYBN
SANT domain-containing protein.
    
 0.952
A0A0R0JDD6
Uncharacterized protein.
    
 0.951
K7LNY4_SOYBN
TPR_REGION domain-containing protein.
    
 0.951
K7LSR3_SOYBN
TPR_REGION domain-containing protein.
    
 0.951
I1LFY7_SOYBN
Uncharacterized protein.
    
 0.937
A0A0R0F5C3
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
    
 0.936
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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