STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GmPhyA3Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1130 aa)    
Predicted Functional Partners:
K7LJB0_SOYBN
BHLH domain-containing protein.
    
 0.961
K7KGH2_SOYBN
BHLH domain-containing protein.
    
 0.958
I1LAY5_SOYBN
BHLH transcription factor.
    
 0.933
K7MZQ4_SOYBN
BHLH domain-containing protein.
    
 0.933
K7N2G1_SOYBN
BHLH transcription factor.
    
 0.933
GMGIA
Uncharacterized protein.
      
 0.923
PHYA-2
Uncharacterized protein.
  
  
0.902
phyA
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
  
  
0.902
FTL3
Flowering locus T-like protein 3.
      
 0.879
FTL4
Flowering locus T-like protein 4.
      
 0.877
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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