Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C6SWM3_SOYBN | I1KX98_SOYBN | C6SWM3 | I1KX98 | Uncharacterized protein. | Uncharacterized protein. | 0.867 |
C6SWM3_SOYBN | K7KDA5_SOYBN | C6SWM3 | K7KDA5 | Uncharacterized protein. | Uncharacterized protein. | 0.864 |
C6SWM3_SOYBN | PsbI | C6SWM3 | A0A0R0G5V6 | Uncharacterized protein. | Uncharacterized protein. | 0.926 |
C6SWM3_SOYBN | psbB | C6SWM3 | Q2PMQ9 | Uncharacterized protein. | Photosystem II CP47 reaction center protein; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily. | 0.867 |
C6SWM3_SOYBN | psbF | C6SWM3 | Q2PMR8 | Uncharacterized protein. | Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.932 |
C6SWM3_SOYBN | psbH | C6SWM3 | Q2PMQ6 | Uncharacterized protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbH family. | 0.864 |
C6SWM3_SOYBN | psbJ | C6SWM3 | Q2PMS0 | Uncharacterized protein. | Photosystem II reaction center protein J; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.928 |
C6SWM3_SOYBN | psbL | C6SWM3 | Q2PMR9 | Uncharacterized protein. | Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. | 0.932 |
C6SWM3_SOYBN | psbM | C6SWM3 | Q2PMT7 | Uncharacterized protein. | Photosystem II reaction center protein M; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface. | 0.929 |
C6SWM3_SOYBN | psbT | C6SWM3 | Q2PMQ8 | Uncharacterized protein. | Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. | 0.928 |
I1KX98_SOYBN | C6SWM3_SOYBN | I1KX98 | C6SWM3 | Uncharacterized protein. | Uncharacterized protein. | 0.867 |
I1KX98_SOYBN | K7KDA5_SOYBN | I1KX98 | K7KDA5 | Uncharacterized protein. | Uncharacterized protein. | 0.987 |
I1KX98_SOYBN | PsbI | I1KX98 | A0A0R0G5V6 | Uncharacterized protein. | Uncharacterized protein. | 0.984 |
I1KX98_SOYBN | psbF | I1KX98 | Q2PMR8 | Uncharacterized protein. | Cytochrome b559 subunit beta; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.995 |
I1KX98_SOYBN | psbH | I1KX98 | Q2PMQ6 | Uncharacterized protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbH family. | 0.987 |
I1KX98_SOYBN | psbJ | I1KX98 | Q2PMS0 | Uncharacterized protein. | Photosystem II reaction center protein J; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.981 |
I1KX98_SOYBN | psbL | I1KX98 | Q2PMR9 | Uncharacterized protein. | Photosystem II reaction center protein L; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization. | 0.992 |
I1KX98_SOYBN | psbM | I1KX98 | Q2PMT7 | Uncharacterized protein. | Photosystem II reaction center protein M; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface. | 0.975 |
I1KX98_SOYBN | psbT | I1KX98 | Q2PMQ8 | Uncharacterized protein. | Photosystem II reaction center protein T; Seems to play a role in the dimerization of PSII. Belongs to the PsbT family. | 0.979 |
K7KDA5_SOYBN | C6SWM3_SOYBN | K7KDA5 | C6SWM3 | Uncharacterized protein. | Uncharacterized protein. | 0.864 |
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