C6SXY5_SOYBN protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C6SXY5_SOYBN

Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. (175 aa)

Predicted Functional Partners:

I1K0B3_SOYBN

0.968

I1MUQ1_SOYBN

0.968

C6SXP4_SOYBN

0.911

I1MAL3_SOYBN

0.911

A0A368UHC0

0.910

I1L8T7_SOYBN

0.857

I1LUQ5_SOYBN

0.826

I1M3J3_SOYBN

0.825

GLYMA_U033300

0.750

I1LR30_SOYBN

0.750

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A368UHC0	C6SXY5_SOYBN	A0A368UHC0	C6SXY5	Uncharacterized protein.	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	0.910
A0A368UHC0	GLYMA_U033300	A0A368UHC0	I1LK85	Uncharacterized protein.	Uncharacterized protein.	0.611
A0A368UHC0	I1K0B3_SOYBN	A0A368UHC0	I1K0B3	Uncharacterized protein.	ThiF domain-containing protein.	0.946
A0A368UHC0	I1LR30_SOYBN	A0A368UHC0	I1LR30	Uncharacterized protein.	Uncharacterized protein.	0.611
A0A368UHC0	I1LUQ5_SOYBN	A0A368UHC0	I1LUQ5	Uncharacterized protein.	Uncharacterized protein.	0.583
A0A368UHC0	I1M3J3_SOYBN	A0A368UHC0	I1M3J3	Uncharacterized protein.	Uncharacterized protein.	0.583
A0A368UHC0	I1MUQ1_SOYBN	A0A368UHC0	I1MUQ1	Uncharacterized protein.	ThiF domain-containing protein.	0.946
C6SXP4_SOYBN	C6SXY5_SOYBN	C6SXP4	C6SXY5	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	0.911
C6SXP4_SOYBN	GLYMA_U033300	C6SXP4	I1LK85	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	Uncharacterized protein.	0.611
C6SXP4_SOYBN	I1K0B3_SOYBN	C6SXP4	I1K0B3	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	ThiF domain-containing protein.	0.946
C6SXP4_SOYBN	I1LR30_SOYBN	C6SXP4	I1LR30	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	Uncharacterized protein.	0.611
C6SXP4_SOYBN	I1LUQ5_SOYBN	C6SXP4	I1LUQ5	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	Uncharacterized protein.	0.583
C6SXP4_SOYBN	I1M3J3_SOYBN	C6SXP4	I1M3J3	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	Uncharacterized protein.	0.583
C6SXP4_SOYBN	I1MUQ1_SOYBN	C6SXP4	I1MUQ1	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	ThiF domain-containing protein.	0.946
C6SXY5_SOYBN	A0A368UHC0	C6SXY5	A0A368UHC0	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	Uncharacterized protein.	0.910
C6SXY5_SOYBN	C6SXP4_SOYBN	C6SXY5	C6SXP4	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	Ubiquitin-fold modifier 1; Ubiquitin-like modifier.	0.911
C6SXY5_SOYBN	GLYMA_U033300	C6SXY5	I1LK85	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	Uncharacterized protein.	0.750
C6SXY5_SOYBN	I1K0B3_SOYBN	C6SXY5	I1K0B3	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	ThiF domain-containing protein.	0.968
C6SXY5_SOYBN	I1L8T7_SOYBN	C6SXY5	I1L8T7	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	Uncharacterized protein.	0.857
C6SXY5_SOYBN	I1LR30_SOYBN	C6SXY5	I1LR30	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.	Uncharacterized protein.	0.750