C6TFJ9_SOYBN protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C6TFJ9_SOYBN

Uncharacterized protein. (83 aa)

Predicted Functional Partners:

I1KEG8_SOYBN

0.824

I1LSM6_SOYBN

0.824

C6TMZ5_SOYBN

0.815

C6TN24_SOYBN

0.815

A0A0R0KP44

0.803

I1NC41_SOYBN

0.803

I1LMN0_SOYBN

0.802

K7MPM2_SOYBN

0.802

A0A0R0KH89

0.800

I1KBQ5_SOYBN

0.800

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0KH89	A0A0R0KP44	A0A0R0KH89	A0A0R0KP44	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A0R0KH89	C6TFJ9_SOYBN	A0A0R0KH89	C6TFJ9	Uncharacterized protein.	Uncharacterized protein.	0.800
A0A0R0KH89	C6TMZ5_SOYBN	A0A0R0KH89	C6TMZ5	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.995
A0A0R0KH89	C6TN24_SOYBN	A0A0R0KH89	C6TN24	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.995
A0A0R0KH89	I1KBQ5_SOYBN	A0A0R0KH89	I1KBQ5	Uncharacterized protein.	Uncharacterized protein.	0.543
A0A0R0KH89	I1KEG8_SOYBN	A0A0R0KH89	I1KEG8	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.994
A0A0R0KH89	I1LMN0_SOYBN	A0A0R0KH89	I1LMN0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.994
A0A0R0KH89	I1LSM6_SOYBN	A0A0R0KH89	I1LSM6	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.994
A0A0R0KH89	I1NC41_SOYBN	A0A0R0KH89	I1NC41	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A0R0KH89	K7MPM2_SOYBN	A0A0R0KH89	K7MPM2	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.994
A0A0R0KP44	A0A0R0KH89	A0A0R0KP44	A0A0R0KH89	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A0R0KP44	C6TFJ9_SOYBN	A0A0R0KP44	C6TFJ9	Uncharacterized protein.	Uncharacterized protein.	0.803
A0A0R0KP44	C6TMZ5_SOYBN	A0A0R0KP44	C6TMZ5	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.994
A0A0R0KP44	C6TN24_SOYBN	A0A0R0KP44	C6TN24	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	0.994
A0A0R0KP44	I1KBQ5_SOYBN	A0A0R0KP44	I1KBQ5	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A0R0KP44	I1KEG8_SOYBN	A0A0R0KP44	I1KEG8	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.995
A0A0R0KP44	I1LMN0_SOYBN	A0A0R0KP44	I1LMN0	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.994
A0A0R0KP44	I1LSM6_SOYBN	A0A0R0KP44	I1LSM6	Uncharacterized protein.	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.	0.995
A0A0R0KP44	I1NC41_SOYBN	A0A0R0KP44	I1NC41	Uncharacterized protein.	Uncharacterized protein.	0.543
A0A0R0KP44	K7MPM2_SOYBN	A0A0R0KP44	K7MPM2	Uncharacterized protein.	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.	0.994