STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GMALMT2Uncharacterized protein. (537 aa)    
Predicted Functional Partners:
I1LLP0_SOYBN
SAGA-associated factor 11.
    
 
 0.576
K7MQ78_SOYBN
SAGA-associated factor 11.
    
 
 0.576
I1K2Q5_SOYBN
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 
 0.562
I1MZR9_SOYBN
Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.
    
 
 0.562
I1LI15_SOYBN
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.559
K7K483_SOYBN
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.559
K7KX85_SOYBN
Uncharacterized protein.
   
 
 0.559
C6SYR1_SOYBN
Uncharacterized protein.
   
 
 0.524
C6T507_SOYBN
Uncharacterized protein.
   
 
 0.524
I1JIU9_SOYBN
Uncharacterized protein.
   
 
 0.524
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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