I1JCQ3_SOYBN protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I1JCQ3_SOYBN

Uncharacterized protein. (259 aa)

Predicted Functional Partners:

I1LCC3_SOYBN

0.640

I1NI24_SOYBN

0.640

I1M945_SOYBN

0.463

K7MNF0_SOYBN

0.463

I1JDM5_SOYBN

0.456

I1N587_SOYBN

0.456

A0A0R0EK57

0.421

A0A0R0I638

0.421

A0A0R0ITW3

0.421

I1JEF9_SOYBN

0.421

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0EK57	I1JCQ3_SOYBN	A0A0R0EK57	I1JCQ3	AAA domain-containing protein.	Uncharacterized protein.	0.421
A0A0R0I638	I1JCQ3_SOYBN	A0A0R0I638	I1JCQ3	Uncharacterized protein.	Uncharacterized protein.	0.421
A0A0R0ITW3	I1JCQ3_SOYBN	A0A0R0ITW3	I1JCQ3	AAA domain-containing protein.	Uncharacterized protein.	0.421
I1JCQ3_SOYBN	A0A0R0EK57	I1JCQ3	A0A0R0EK57	Uncharacterized protein.	AAA domain-containing protein.	0.421
I1JCQ3_SOYBN	A0A0R0I638	I1JCQ3	A0A0R0I638	Uncharacterized protein.	Uncharacterized protein.	0.421
I1JCQ3_SOYBN	A0A0R0ITW3	I1JCQ3	A0A0R0ITW3	Uncharacterized protein.	AAA domain-containing protein.	0.421
I1JCQ3_SOYBN	I1JDM5_SOYBN	I1JCQ3	I1JDM5	Uncharacterized protein.	Protein-lysine N-methyltransferase GLYMA_02G090500; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.456
I1JCQ3_SOYBN	I1JEF9_SOYBN	I1JCQ3	I1JEF9	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.421
I1JCQ3_SOYBN	I1LCC3_SOYBN	I1JCQ3	I1LCC3	Uncharacterized protein.	ETF domain-containing protein.	0.640
I1JCQ3_SOYBN	I1M945_SOYBN	I1JCQ3	I1M945	Uncharacterized protein.	Methyltransf_12 domain-containing protein.	0.463
I1JCQ3_SOYBN	I1N587_SOYBN	I1JCQ3	I1N587	Uncharacterized protein.	Protein-lysine N-methyltransferase GLYMA_18G292800; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	0.456
I1JCQ3_SOYBN	I1NI24_SOYBN	I1JCQ3	I1NI24	Uncharacterized protein.	ETF domain-containing protein.	0.640
I1JCQ3_SOYBN	K7MNF0_SOYBN	I1JCQ3	K7MNF0	Uncharacterized protein.	Methyltransf_12 domain-containing protein.	0.463
I1JDM5_SOYBN	I1JCQ3_SOYBN	I1JDM5	I1JCQ3	Protein-lysine N-methyltransferase GLYMA_02G090500; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Uncharacterized protein.	0.456
I1JDM5_SOYBN	I1M945_SOYBN	I1JDM5	I1M945	Protein-lysine N-methyltransferase GLYMA_02G090500; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Methyltransf_12 domain-containing protein.	0.634
I1JDM5_SOYBN	K7MNF0_SOYBN	I1JDM5	K7MNF0	Protein-lysine N-methyltransferase GLYMA_02G090500; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.	Methyltransf_12 domain-containing protein.	0.634
I1JEF9_SOYBN	I1JCQ3_SOYBN	I1JEF9	I1JCQ3	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.421
I1LCC3_SOYBN	I1JCQ3_SOYBN	I1LCC3	I1JCQ3	ETF domain-containing protein.	Uncharacterized protein.	0.640
I1LCC3_SOYBN	I1M945_SOYBN	I1LCC3	I1M945	ETF domain-containing protein.	Methyltransf_12 domain-containing protein.	0.461
I1LCC3_SOYBN	K7MNF0_SOYBN	I1LCC3	K7MNF0	ETF domain-containing protein.	Methyltransf_12 domain-containing protein.	0.461