STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1JGN5_SOYBNRNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II. (442 aa)    
Predicted Functional Partners:
A0A0R0G7B5
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.941
I1KZY8_SOYBN
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.941
A0A0R4J3R4
RPOLD domain-containing protein.
    
 0.910
I1NDC0_SOYBN
RPOLD domain-containing protein.
    
 0.910
A0A0R0JZD5
Uncharacterized protein.
    
 0.792
A0A0R0KRP1
Uncharacterized protein.
    
 0.792
C6TL77_SOYBN
Uncharacterized protein.
    
 0.792
I1K7N0_SOYBN
Uncharacterized protein.
    
 0.792
A0A0R0GFZ9
SHS2_Rpb7-N domain-containing protein.
    
 0.790
I1L3V4_SOYBN
DUF4101 domain-containing protein.
    
 0.790
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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