I1KNI1_SOYBN protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I1KNI1_SOYBN

Uncharacterized protein. (191 aa)

Predicted Functional Partners:

A0A0R4J389

0.949

psaI

0.936

psaD

0.880

I1NGD2_SOYBN

0.880

I1L250_SOYBN

0.878

K7MCH3_SOYBN

0.878

C6SVU4_SOYBN

0.875

I1JVN0_SOYBN

0.875

I1LKN9_SOYBN

0.825

K7LTV8_SOYBN

0.825

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R4J389	C6SVU4_SOYBN	A0A0R4J389	C6SVU4	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0R4J389	I1JVN0_SOYBN	A0A0R4J389	I1JVN0	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0R4J389	I1KNI1_SOYBN	A0A0R4J389	I1KNI1	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A0R4J389	I1L250_SOYBN	A0A0R4J389	I1L250	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0R4J389	I1LKN9_SOYBN	A0A0R4J389	I1LKN9	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0R4J389	I1NGD2_SOYBN	A0A0R4J389	I1NGD2	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A0R4J389	K7LTV8_SOYBN	A0A0R4J389	K7LTV8	Uncharacterized protein.	Uncharacterized protein.	0.990
A0A0R4J389	K7MCH3_SOYBN	A0A0R4J389	K7MCH3	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0R4J389	psaD	A0A0R4J389	A5Z2K3	Uncharacterized protein.	Photosystem I subunit PsaD.	0.998
A0A0R4J389	psaI	A0A0R4J389	P49159	Uncharacterized protein.	Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family.	0.974
C6SVU4_SOYBN	A0A0R4J389	C6SVU4	A0A0R4J389	Uncharacterized protein.	Uncharacterized protein.	0.991
C6SVU4_SOYBN	I1JVN0_SOYBN	C6SVU4	I1JVN0	Uncharacterized protein.	Uncharacterized protein.	0.900
C6SVU4_SOYBN	I1KNI1_SOYBN	C6SVU4	I1KNI1	Uncharacterized protein.	Uncharacterized protein.	0.875
C6SVU4_SOYBN	I1L250_SOYBN	C6SVU4	I1L250	Uncharacterized protein.	Uncharacterized protein.	0.990
C6SVU4_SOYBN	I1LKN9_SOYBN	C6SVU4	I1LKN9	Uncharacterized protein.	Uncharacterized protein.	0.976
C6SVU4_SOYBN	I1NGD2_SOYBN	C6SVU4	I1NGD2	Uncharacterized protein.	Uncharacterized protein.	0.978
C6SVU4_SOYBN	K7LTV8_SOYBN	C6SVU4	K7LTV8	Uncharacterized protein.	Uncharacterized protein.	0.976
C6SVU4_SOYBN	K7MCH3_SOYBN	C6SVU4	K7MCH3	Uncharacterized protein.	Uncharacterized protein.	0.990
C6SVU4_SOYBN	psaD	C6SVU4	A5Z2K3	Uncharacterized protein.	Photosystem I subunit PsaD.	0.978
C6SVU4_SOYBN	psaI	C6SVU4	P49159	Uncharacterized protein.	Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family.	0.977