STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1KZU3_SOYBNUncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (185 aa)    
Predicted Functional Partners:
I1MMC9_SOYBN
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.877
PDS1
15-cis-phytoene desaturase, chloroplastic/chromoplastic; Converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene with a concomitant isomerization of two neighboring double bonds at the C9 and C9' positions from trans to cis; Belongs to the carotenoid/retinoid oxidoreductase family.
      
 0.710
atp4
ATPase subunit 4.
      
 0.701
A0A0R0KJL0
Peroxisomal membrane protein PEX16.
     
 0.561
I1JKG7_SOYBN
Peroxisomal membrane protein PEX16.
     
 0.561
I1KIJ1_SOYBN
Peroxisomal membrane protein PEX16.
     
 0.561
I1M957_SOYBN
RING-type domain-containing protein.
     
 0.540
K7MNE6_SOYBN
RING-type domain-containing protein.
     
 0.540
I1K0Q2_SOYBN
Uncharacterized protein.
    
 0.529
I1MV13_SOYBN
Uncharacterized protein.
    
 0.529
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.