I1M3U2_SOYBN protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

I1M3U2_SOYBN

Uncharacterized protein. (1034 aa)

Predicted Functional Partners:

I1LZW4_SOYBN

0.996

I1MTZ8_SOYBN

0.996

C6SWW8_SOYBN

0.995

A0A0R0HNK2

0.992

C6T0C3_SOYBN

0.992

I1NHQ1_SOYBN

0.992

I1M5U8_SOYBN

0.990

I1MCE8_SOYBN

0.990

C6SVH9_SOYBN

0.989

C6SYH7_SOYBN

0.989

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0R0HNK2	C6SVH9_SOYBN	A0A0R0HNK2	C6SVH9	Uncharacterized protein.	Small nuclear ribonucleoprotein G.	0.988
A0A0R0HNK2	C6SWW8_SOYBN	A0A0R0HNK2	C6SWW8	Uncharacterized protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.995
A0A0R0HNK2	C6SYH7_SOYBN	A0A0R0HNK2	C6SYH7	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.972
A0A0R0HNK2	C6T0C3_SOYBN	A0A0R0HNK2	C6T0C3	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A0R0HNK2	I1LZW4_SOYBN	A0A0R0HNK2	I1LZW4	Uncharacterized protein.	Tr-type G domain-containing protein.	0.992
A0A0R0HNK2	I1M3U2_SOYBN	A0A0R0HNK2	I1M3U2	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A0R0HNK2	I1M5U8_SOYBN	A0A0R0HNK2	I1M5U8	Uncharacterized protein.	MPN domain-containing protein.	0.991
A0A0R0HNK2	I1MCE8_SOYBN	A0A0R0HNK2	I1MCE8	Uncharacterized protein.	MPN domain-containing protein.	0.991
A0A0R0HNK2	I1MTZ8_SOYBN	A0A0R0HNK2	I1MTZ8	Uncharacterized protein.	Tr-type G domain-containing protein.	0.992
A0A0R0HNK2	I1NHQ1_SOYBN	A0A0R0HNK2	I1NHQ1	Uncharacterized protein.	Uncharacterized protein.	0.569
C6SVH9_SOYBN	A0A0R0HNK2	C6SVH9	A0A0R0HNK2	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.988
C6SVH9_SOYBN	C6SWW8_SOYBN	C6SVH9	C6SWW8	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.999
C6SVH9_SOYBN	C6SYH7_SOYBN	C6SVH9	C6SYH7	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
C6SVH9_SOYBN	C6T0C3_SOYBN	C6SVH9	C6T0C3	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.988
C6SVH9_SOYBN	I1LZW4_SOYBN	C6SVH9	I1LZW4	Small nuclear ribonucleoprotein G.	Tr-type G domain-containing protein.	0.992
C6SVH9_SOYBN	I1M3U2_SOYBN	C6SVH9	I1M3U2	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.989
C6SVH9_SOYBN	I1M5U8_SOYBN	C6SVH9	I1M5U8	Small nuclear ribonucleoprotein G.	MPN domain-containing protein.	0.993
C6SVH9_SOYBN	I1MCE8_SOYBN	C6SVH9	I1MCE8	Small nuclear ribonucleoprotein G.	MPN domain-containing protein.	0.993
C6SVH9_SOYBN	I1MTZ8_SOYBN	C6SVH9	I1MTZ8	Small nuclear ribonucleoprotein G.	Tr-type G domain-containing protein.	0.992
C6SVH9_SOYBN	I1NHQ1_SOYBN	C6SVH9	I1NHQ1	Small nuclear ribonucleoprotein G.	Uncharacterized protein.	0.988