GMTPS8 protein (Glycine max) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GMTPS8

Uncharacterized protein. (602 aa)

Predicted Functional Partners:

I1L6A2_SOYBN

0.900

I1LJH2_SOYBN

0.900

I1LQ64_SOYBN

0.900

I1N3Z3_SOYBN

0.900

I1L053_SOYBN

0.839

I1MFU1_SOYBN

0.839

I1LKV0_SOYBN

0.800

I1M325_SOYBN

0.800

I1MVR8_SOYBN

0.780

K7KPC0_SOYBN

0.780

Your Current Organism:

Glycine max

NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GMTPS8	I1L053_SOYBN	K7LDG0	I1L053	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.839
GMTPS8	I1L6A2_SOYBN	K7LDG0	I1L6A2	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.900
GMTPS8	I1LJH2_SOYBN	K7LDG0	I1LJH2	Uncharacterized protein.	Uncharacterized protein.	0.900
GMTPS8	I1LKV0_SOYBN	K7LDG0	I1LKV0	Uncharacterized protein.	Uncharacterized protein; Belongs to the IPP transferase family.	0.800
GMTPS8	I1LQ64_SOYBN	K7LDG0	I1LQ64	Uncharacterized protein.	Uncharacterized protein.	0.900
GMTPS8	I1M325_SOYBN	K7LDG0	I1M325	Uncharacterized protein.	Uncharacterized protein; Belongs to the IPP transferase family.	0.800
GMTPS8	I1MFU1_SOYBN	K7LDG0	I1MFU1	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.839
GMTPS8	I1MVR8_SOYBN	K7LDG0	I1MVR8	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.780
GMTPS8	I1N3Z3_SOYBN	K7LDG0	I1N3Z3	Uncharacterized protein.	Nudix hydrolase domain-containing protein.	0.900
GMTPS8	K7KPC0_SOYBN	K7LDG0	K7KPC0	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.780
I1L053_SOYBN	GMTPS8	I1L053	K7LDG0	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.839
I1L053_SOYBN	I1L6A2_SOYBN	I1L053	I1L6A2	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Nudix hydrolase domain-containing protein.	0.993
I1L053_SOYBN	I1LJH2_SOYBN	I1L053	I1LJH2	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.940
I1L053_SOYBN	I1LKV0_SOYBN	I1L053	I1LKV0	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the IPP transferase family.	0.666
I1L053_SOYBN	I1LQ64_SOYBN	I1L053	I1LQ64	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.940
I1L053_SOYBN	I1M325_SOYBN	I1L053	I1M325	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the IPP transferase family.	0.666
I1L053_SOYBN	I1MFU1_SOYBN	I1L053	I1MFU1	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.652
I1L053_SOYBN	I1MVR8_SOYBN	I1L053	I1MVR8	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.932
I1L053_SOYBN	I1N3Z3_SOYBN	I1L053	I1N3Z3	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Nudix hydrolase domain-containing protein.	0.993
I1L053_SOYBN	K7KPC0_SOYBN	I1L053	K7KPC0	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.932