STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUBI-1Polyubiquitin; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-48-linked is involved in protein degradatio [...] (305 aa)    
Predicted Functional Partners:
K7KMT5_SOYBN
Uncharacterized protein.
   
 0.976
K7MKM1_SOYBN
Uncharacterized protein.
   
 0.976
I1KZ98_SOYBN
Uncharacterized protein.
   
 0.922
I1N2A0_SOYBN
Uncharacterized protein.
   
 0.922
I1L8R7_SOYBN
HECT domain-containing protein.
   
 0.898
K7LZL3_SOYBN
HECT domain-containing protein.
   
 0.898
A0A0R0I6D2
Uncharacterized protein.
   
 0.876
I1K2S3_SOYBN
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.870
A0A0R0H9D3
HECT domain-containing protein.
   
 0.858
I1JSE2_SOYBN
HECT domain-containing protein.
   
 0.858
Your Current Organism:
Glycine max
NCBI taxonomy Id: 3847
Other names: G. max, Glycine max (L.) Merr., soybean, soybeans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.