A0A4Y8CK41 protein (Botryotinia calthae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Y8CK41

BZIP domain-containing protein. (291 aa)

Predicted Functional Partners:

A0A4Y8CI86

0.989

A0A4Y8DCG4

0.989

A0A4Y8DFM0

0.987

A0A4Y8CJA5

0.986

A0A4Y8D282

0.986

A0A4Y8DED8

0.986

A0A4Y8DFE9

0.986

A0A4Y8CET9

0.985

A0A4Y8CQX7

0.985

A0A4Y8CZR3

0.985

Your Current Organism:

Botryotinia calthae

NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Y8CET9	A0A4Y8CI86	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.991
A0A4Y8CET9	A0A4Y8CJA5	Ribosomal_S10 domain-containing protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.999
A0A4Y8CET9	A0A4Y8CK41	Ribosomal_S10 domain-containing protein.	BZIP domain-containing protein.	0.985
A0A4Y8CET9	A0A4Y8CQX7	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
A0A4Y8CET9	A0A4Y8CZR3	Ribosomal_S10 domain-containing protein.	KOW domain-containing protein.	0.999
A0A4Y8CET9	A0A4Y8D282	Ribosomal_S10 domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
A0A4Y8CET9	A0A4Y8DCG4	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.989
A0A4Y8CET9	A0A4Y8DED8	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.999
A0A4Y8CET9	A0A4Y8DFE9	Ribosomal_S10 domain-containing protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.999
A0A4Y8CET9	A0A4Y8DFM0	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
A0A4Y8CI86	A0A4Y8CET9	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.991
A0A4Y8CI86	A0A4Y8CJA5	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.989
A0A4Y8CI86	A0A4Y8CK41	Uncharacterized protein.	BZIP domain-containing protein.	0.989
A0A4Y8CI86	A0A4Y8CQX7	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A4Y8CI86	A0A4Y8CZR3	Uncharacterized protein.	KOW domain-containing protein.	0.991
A0A4Y8CI86	A0A4Y8D282	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.995
A0A4Y8CI86	A0A4Y8DCG4	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A4Y8CI86	A0A4Y8DED8	Uncharacterized protein.	Uncharacterized protein.	0.989
A0A4Y8CI86	A0A4Y8DFE9	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.989
A0A4Y8CI86	A0A4Y8DFM0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.994