A0A4Y8CWC2 protein (Botryotinia calthae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A4Y8CWC2

Uncharacterized protein. (406 aa)

Predicted Functional Partners:

A0A4Y8D155

0.988

A0A4Y8CZA3

0.976

A0A4Y8DC87

0.926

A0A4Y8DDH0

0.888

A0A4Y8DBE0

0.877

A0A4Y8DGC1

0.872

A0A4Y8D9G2

0.834

A0A4Y8CCY2

0.829

A0A4Y8D6Q1

0.829

A0A4Y8DH04

0.829

Your Current Organism:

Botryotinia calthae

NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4Y8CCY2	A0A4Y8CWC2	Uncharacterized protein.	Uncharacterized protein.	0.829
A0A4Y8CCY2	A0A4Y8CZA3	Uncharacterized protein.	Uncharacterized protein.	0.596
A0A4Y8CCY2	A0A4Y8D155	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.596
A0A4Y8CCY2	A0A4Y8DBE0	Uncharacterized protein.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.819
A0A4Y8CCY2	A0A4Y8DC87	Uncharacterized protein.	Uncharacterized protein.	0.810
A0A4Y8CCY2	A0A4Y8DDH0	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A4Y8CCY2	A0A4Y8DGC1	Uncharacterized protein.	Uncharacterized protein.	0.758
A0A4Y8CWC2	A0A4Y8CCY2	Uncharacterized protein.	Uncharacterized protein.	0.829
A0A4Y8CWC2	A0A4Y8CZA3	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A4Y8CWC2	A0A4Y8D155	Uncharacterized protein.	Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.	0.988
A0A4Y8CWC2	A0A4Y8D6Q1	Uncharacterized protein.	Uncharacterized protein.	0.829
A0A4Y8CWC2	A0A4Y8D9G2	Uncharacterized protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.834
A0A4Y8CWC2	A0A4Y8DBE0	Uncharacterized protein.	Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.	0.877
A0A4Y8CWC2	A0A4Y8DC87	Uncharacterized protein.	Uncharacterized protein.	0.926
A0A4Y8CWC2	A0A4Y8DDH0	Uncharacterized protein.	Uncharacterized protein.	0.888
A0A4Y8CWC2	A0A4Y8DGC1	Uncharacterized protein.	Uncharacterized protein.	0.872
A0A4Y8CWC2	A0A4Y8DH04	Uncharacterized protein.	Uncharacterized protein.	0.829
A0A4Y8CZA3	A0A4Y8CCY2	Uncharacterized protein.	Uncharacterized protein.	0.596
A0A4Y8CZA3	A0A4Y8CWC2	Uncharacterized protein.	Uncharacterized protein.	0.976
A0A4Y8CZA3	A0A4Y8D6Q1	Uncharacterized protein.	Uncharacterized protein.	0.596