STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y8CXL4Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
A0A4Y8DG76
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
 
  
   0.694
A0A4Y8D360
Uncharacterized protein.
    
  0.651
A0A4Y8DBP2
Uncharacterized protein.
    
 0.533
A0A4Y8D2J0
Uncharacterized protein.
    
  0.528
A0A4Y8D6M9
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.477
A0A4Y8CU09
SUN domain-containing protein.
    
 0.470
A0A4Y8CK41
BZIP domain-containing protein.
  
 
   0.457
A0A4Y8DF08
Uncharacterized protein.
   
 
  0.447
A0A4Y8D6K4
Uncharacterized protein.
    
 0.446
A0A4Y8DCP8
Uncharacterized protein.
    
 0.446
Your Current Organism:
Botryotinia calthae
NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert
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