STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y8CYI1Uncharacterized protein. (455 aa)    
Predicted Functional Partners:
A0A4Y8CMX1
TFIID_20kDa domain-containing protein.
    
 0.996
A0A4Y8D081
SCA7 domain-containing protein.
    
 0.995
A0A4Y8DD76
TAF domain-containing protein.
    
 0.995
A0A4Y8D2J0
Uncharacterized protein.
    
 0.994
A0A4Y8DES5
Uncharacterized protein.
   
 0.994
A0A4Y8DHN2
Bromo domain-containing protein.
    
 0.994
A0A4Y8DI48
Uncharacterized protein.
    
 0.994
A0A4Y8CWU3
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.989
A0A4Y8D7E6
Uncharacterized protein.
  
 
 0.987
A0A4Y8D8B7
SGF29 C-terminal domain-containing protein.
    
 0.981
Your Current Organism:
Botryotinia calthae
NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert
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