STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y8D2L3Uncharacterized protein. (891 aa)    
Predicted Functional Partners:
A0A4Y8DD31
CID domain-containing protein.
   
 0.995
A0A4Y8DEN5
Sas10 domain-containing protein.
   
  0.992
A0A4Y8CZI7
WD_REPEATS_REGION domain-containing protein.
   
 0.991
A0A4Y8D035
S4 RNA-binding domain-containing protein.
   
  0.991
A0A4Y8DDG9
Uncharacterized protein.
   
 
 0.990
A0A4Y8DDK3
Uncharacterized protein.
  
0.990
A0A4Y8DEG6
Uncharacterized protein.
   
 
 0.990
A0A4Y8DGK0
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.990
A0A4Y8CU16
Uncharacterized protein.
  
0.989
A0A4Y8CYC1
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 0.989
Your Current Organism:
Botryotinia calthae
NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert
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