STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y8D2V6Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
A0A4Y8CGR3
Uncharacterized protein.
   
 
  0.528
A0A4Y8D139
Uncharacterized protein.
   
 
  0.528
A0A4Y8CH79
Uncharacterized protein.
   
   0.461
A0A4Y8CN52
Uncharacterized protein.
    
  0.447
A0A4Y8CRG4
Uncharacterized protein.
     
 0.445
A0A4Y8D1X0
Uncharacterized protein.
     
 0.445
A0A4Y8D3L7
Uncharacterized protein.
     
 0.445
Your Current Organism:
Botryotinia calthae
NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert
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