STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y8D3W8Uncharacterized protein. (1224 aa)    
Predicted Functional Partners:
A0A4Y8CNM7
USP domain-containing protein; Belongs to the peptidase C19 family.
  
 
  0.728
A0A4Y8CZY9
Alginate_lyase domain-containing protein.
    
  0.716
A0A4Y8CSR3
Uncharacterized protein.
   
  0.712
A0A4Y8DHD5
Uncharacterized protein.
   
  0.712
A0A4Y8D8D3
Uncharacterized protein.
    
 0.682
A0A4Y8CSG6
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.656
A0A4Y8CP96
Uncharacterized protein.
    
  0.653
A0A4Y8CPH0
Uncharacterized protein; Belongs to the peptidase C19 family.
    
  0.653
A0A4Y8DFS6
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.653
A0A4Y8D8I5
Uncharacterized protein.
    
  0.645
Your Current Organism:
Botryotinia calthae
NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert
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