STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y8D6I1Uncharacterized protein. (1885 aa)    
Predicted Functional Partners:
A0A4Y8CV94
Uncharacterized protein.
    
 
 0.991
A0A4Y8CU62
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.921
A0A4Y8DC43
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.898
A0A4Y8DIY6
SAM domain-containing protein.
    
 
 0.799
A0A4Y8D2J0
Uncharacterized protein.
    
 
 0.661
A0A4Y8CKT8
Uncharacterized protein.
  
  
0.651
A0A4Y8CXU4
PHD-type domain-containing protein.
   
 
 0.637
A0A4Y8D8Y8
Uncharacterized protein.
   
  
 0.633
A0A4Y8D396
TFIIB-type domain-containing protein.
    
 
 0.608
A0A4Y8CMX1
TFIID_20kDa domain-containing protein.
    
 
 0.571
Your Current Organism:
Botryotinia calthae
NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert
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