STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y8DFP1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (221 aa)    
Predicted Functional Partners:
A0A4Y8DFF9
PUA domain-containing protein.
   
 0.999
A0A4Y8CS90
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.998
A0A4Y8DC12
Uncharacterized protein.
   
 0.997
A0A4Y8CX26
TruB_N domain-containing protein.
   
 0.984
A0A4Y8DCJ5
Uncharacterized protein.
    
 0.974
A0A4Y8DAX1
Uncharacterized protein.
   
 
 0.972
A0A4Y8D3D1
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.965
A0A4Y8CSI9
Nop domain-containing protein.
  
 
 0.951
A0A4Y8DHP2
Nop domain-containing protein.
   
 
 0.945
A0A4Y8CKY2
Ribosomal_L7Ae domain-containing protein.
   
 0.940
Your Current Organism:
Botryotinia calthae
NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.