STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4Y8DHK6Uncharacterized protein. (402 aa)    
Predicted Functional Partners:
A0A4Y8DBA8
RNase_PH domain-containing protein.
    
  0.929
A0A4Y8DKD2
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
 0.909
A0A4Y8CV37
Uncharacterized protein.
    
 
 0.877
A0A4Y8CLX4
Uncharacterized protein.
    
 0.774
A0A4Y8CN10
NTP_transf_9 domain-containing protein.
   
 0.751
A0A4Y8CR90
Nudix hydrolase domain-containing protein.
   
 0.751
A0A4Y8DGM0
Uncharacterized protein.
   
 0.751
A0A4Y8CYQ9
RF_PROK_I domain-containing protein.
     
 0.739
A0A4Y8CE78
Uncharacterized protein.
   
  0.738
A0A4Y8CPF5
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
   
  0.738
Your Current Organism:
Botryotinia calthae
NCBI taxonomy Id: 38488
Other names: B. calthae, Botrytis calthae, Botrytis calthae Hennebert
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