STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0078GTPase-like protein. (643 aa)    
Predicted Functional Partners:
Q91_0711
FHA domain containing protein.
  
     0.712
Q91_1835
Cell cycle protein kinase CDC5/MSD2.
  
     0.672
Q91_1362
Type IV pilus assembly PilZ.
  
     0.647
Q91_1396
Tfp pilus assembly protein FimV.
  
     0.606
Q91_0052
Tfp pilus assembly protein, ATPase PilM.
  
     0.589
Q91_1918
cAMP-dependent protein kinase regulatory chain.
  
     0.517
pilP
Type 4 fimbrial biogenesis protein PilP.
  
     0.510
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.510
yGGT
Resistance protein.
       0.510
ubiC
Chorismate:pyruvate lyase, 4-hydroxybenzoate synthetase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.
  
     0.502
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.