STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0088OsmC-like protein. (145 aa)    
Predicted Functional Partners:
Q91_0915
CsbD-like protein; Belongs to the UPF0337 (CsbD) family.
  
  
 0.596
Q91_1003
DNA helicase/exodeoxyribonuclease V, subunit B.
   
    0.579
Q91_0486
Hybrid histidine kinase.
   
  
 0.547
Q91_1002
Diguanylate cyclase with PAS/PAC and GAF sensors.
   
    0.541
Q91_1872
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor.
   
    0.541
omlA
SmpA/OmlA domain protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
  
 0.526
Q91_2104
Peptidoglycan-binding LysM-like protein.
   
  
 0.504
Q91_0087
ATP-dependent helicase HrpA.
       0.476
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.405
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.