STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0490FAD linked oxidase domain protein. (478 aa)    
Predicted Functional Partners:
Q91_0494
FAD linked oxidase domain protein.
 
  
 
0.980
phnA4
PAH dioxygenase component ferredoxin reductase.
   
 0.907
Q91_0493
P-cresol methylhydroxylase subunit.
   
   0.837
Q91_0491
Hypothetical protein.
       0.770
Q91_0492
UbiD family decarboxylase; Belongs to the UbiD family.
       0.769
Q91_0495
Hypothetical protein.
       0.741
Q91_0786
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit.
   
   0.734
Q91_1440
Tungsten-containing formate dehydrogenase beta subunit.
   
   0.734
ubiX2
3-Polyprenyl-4-hydroxybenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.621
Q91_1355
AMP-dependent synthetase and ligase.
  
 
 0.620
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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