Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Q91_0498 | Q91_0499 | AraC-family transcriptional regulator. | Fatty acid desaturase. | 0.605 |
Q91_0498 | Q91_0963 | AraC-family transcriptional regulator. | Biphenyl-2,3-diol 1,2-dioxygenase. | 0.418 |
Q91_0498 | Q91_1900 | AraC-family transcriptional regulator. | Xylene monooxygenase hydroxylase subunit. | 0.507 |
Q91_0498 | Q91_2049 | AraC-family transcriptional regulator. | Xylene monooxygenase subunit 1. | 0.504 |
Q91_0499 | Q91_0498 | Fatty acid desaturase. | AraC-family transcriptional regulator. | 0.605 |
Q91_0499 | Q91_0932 | Fatty acid desaturase. | Extradiol dioxygenase. | 0.693 |
Q91_0499 | Q91_0963 | Fatty acid desaturase. | Biphenyl-2,3-diol 1,2-dioxygenase. | 0.635 |
Q91_0499 | Q91_1314 | Fatty acid desaturase. | Lactoylglutathione lyase-like lyase. | 0.662 |
Q91_0499 | Q91_1315 | Fatty acid desaturase. | Glyoxalase family protein. | 0.637 |
Q91_0499 | Q91_1900 | Fatty acid desaturase. | Xylene monooxygenase hydroxylase subunit. | 0.674 |
Q91_0499 | Q91_2049 | Fatty acid desaturase. | Xylene monooxygenase subunit 1. | 0.585 |
Q91_0499 | Q91_2198 | Fatty acid desaturase. | Glycosyl hydrolase, BNR repeat protein. | 0.647 |
Q91_0499 | Q91_2200 | Fatty acid desaturase. | ABC-type dipeptide transport system, periplasmic component. | 0.637 |
Q91_0499 | Q91_2224 | Fatty acid desaturase. | Extradiol dioxygenase. | 0.692 |
Q91_0932 | Q91_0499 | Extradiol dioxygenase. | Fatty acid desaturase. | 0.693 |
Q91_0932 | Q91_1314 | Extradiol dioxygenase. | Lactoylglutathione lyase-like lyase. | 0.525 |
Q91_0932 | Q91_1315 | Extradiol dioxygenase. | Glyoxalase family protein. | 0.514 |
Q91_0932 | Q91_1900 | Extradiol dioxygenase. | Xylene monooxygenase hydroxylase subunit. | 0.669 |
Q91_0932 | Q91_2049 | Extradiol dioxygenase. | Xylene monooxygenase subunit 1. | 0.638 |
Q91_0963 | Q91_0498 | Biphenyl-2,3-diol 1,2-dioxygenase. | AraC-family transcriptional regulator. | 0.418 |
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