STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_05082-hydroxypent-2,4-dienoate hydratase. (261 aa)    
Predicted Functional Partners:
Q91_0510
4-hydroxy-2-oxovalerate aldolase NahM; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
 
 0.990
Q91_0511
4-oxalocrotonate decarboxylase NahK.
 
  
 
0.969
lapG
4-hydroxy-2-oxovalerate aldolase 1; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
 
 0.966
nahO
Acetaldehyde dehydrogenase 2/3; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
  
 0.956
Q91_0515
Alpha/beta hydrolase fold protein.
  
 
 0.918
Q91_0965
Alpha/beta hydrolase fold protein.
  
 
 0.918
Q91_2195
Alpha/beta hydrolase fold-containing protein.
  
 
 0.918
bphD1
Alpha/beta hydrolase fold protein.
   
 
 0.902
xylE
Catechol 2,3 dioxygenase, XylE.
 
   
 0.873
Q91_1490
Acetaldehyde dehydrogenase 5; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
  
 0.861
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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