STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0524ABC-type multidrug transport system, permease component. (257 aa)    
Predicted Functional Partners:
Q91_0523
ABC transporter, ATPase subunit.
  
 0.973
nodI
ABC-type multidrug transport system ATPase component.
  
 0.743
Q91_0522
Malate dehydrogenase, Phosphate acetyltransferase.
  
    0.573
Q91_0617
ABC transporter, ATP-binding protein/permease.
  
 
 0.565
Q91_1379
Nod factor ABC transporter, permease protein.
  
  
 
0.531
Q91_1355
AMP-dependent synthetase and ligase.
  
  
 0.520
Q91_1198
Nitroreductase family protein.
  
  
 0.499
Q91_2249
Nitroreductase family protein.
  
  
 0.499
Q91_1674
Nod factor export ATP-binding protein I.
  
 0.480
nqrA
Na(+)-translocating NADH-quinone reductase, A subunit; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
       0.463
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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