STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q91_0617ABC transporter, ATP-binding protein/permease. (929 aa)    
Predicted Functional Partners:
Q91_0616
HlyD-family secretion protein, yhiI-like protein.
  
 0.973
Q91_0618
ABC transporter, ATP-binding protein, permease.
 
 
0.926
Q91_1794
ABC transporter, permease protein.
  
 
 0.835
Q91_1198
Nitroreductase family protein.
  
  
 0.656
Q91_2249
Nitroreductase family protein.
  
  
 0.656
Q91_0940
Abortive infection protein.
  
  
 0.622
atpD-1
H(+)-transporting two-sector ATPase, F(1) beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
    
 
 0.622
atpA-1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
    
   0.604
Q91_1347
MATE efflux family protein.
  
  
 0.590
Q91_1355
AMP-dependent synthetase and ligase.
  
  
 0.571
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
Server load: low (16%) [HD]