STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrRAnti-sigma factor. (233 aa)    
Predicted Functional Partners:
Q91_0653
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.985
Q91_0658
Amine oxidase, flavin-containing.
 
  
 0.910
Q91_0659
Plasmid partition ParA protein.
 
  
 0.863
Q91_0654
Putative membrane protein.
 
   
 0.829
algU,
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.751
Q91_0660
Cyclopropane-fatty-acyl-phospholipid synthase protein.
 
   
 0.739
Q91_0651
Putative membrane protein.
 
     0.730
Q91_0657
Short-chain dehydrogenase/reductase SDR.
 
   
 0.675
Q91_0656
Transcriptional regulator.
 
     0.666
Q91_0655
Fatty acid desaturase subfamily.
       0.522
Your Current Organism:
Cycloclasticus sp. P1
NCBI taxonomy Id: 385025
Other names: C. sp. P1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.